Research Object Crate for ERGA HiC Pri Scaffolding+QC YaHS v2505 (WF4)

Original URL: https://workflowhub.eu/workflows/1164/ro_crate?version=2

The workflow takes trimmed HiC paired-end reads collection, and Pri/Alt assemblies to produce a scaffolded primary assembly (and alternate contigs) using YaHS. It also runs Pretext and all the QC analyses (gfastats, BUSCO, and Merqury).

Author
Diego De Panis, ERGA
License
MIT

Contents

Main Workflow: ERGA HiC Pri Scaffolding+QC YaHS v2505 (WF4)
Size: 90142 bytes
Main Workflow Diagram: Scaf_yahs_prialt_2505.png
Size: 569058 bytes