Research Object Crate for ERGA HiFi PriAlt Purge+QC v2409 (WF3)

Original URL: https://workflowhub.eu/workflows/1163/ro_crate?version=1

The workflow takes a trimmed HiFi reads collection, Pri/Alt contigs, and the values for transition parameter and max coverage depth (calculated from WF1) to run Purge_Dups. It produces purged Pri and Alt contigs assemblies, and runs all the QC analysis (gfastats, BUSCO, and Merqury).

Author
Diego De Panis, ERGA
License
MIT

Contents

Main Workflow: ERGA HiFi PriAlt Purge+QC v2409 (WF3)
Size: 81048 bytes
Main Workflow Diagram: Purge_hifi_prialt_2409.png
Size: 181841 bytes