GFF3 validation is conducted with gt/gff3 and gt/gff3validate tools from GenomeTools and a custom script which check correspondence between FASTA and GFF3 sequence identifiers and coordinates.

Reference:

Gremme G, Steinbiss S, Kurtz S. 2013. "GenomeTools: A Comprehensive Software Library for Efficient Processing of Structured Genome Annotations," in IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 10, no. 3, pp. 645-656, May 2013, doi: 10.1109/TCBB.2013.68

Version: {{ all_stats_dicts['VERSIONS']['GT_GFF3']['genometools'] }}

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