/*
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    Nextflow config file for running minimal tests
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
    Defines input files and everything required to run a fast and simple pipeline test.

    Use as follows:
        nextflow run nf-core/phyloplace -profile test,<docker/singularity> --outdir <OUTDIR>

----------------------------------------------------------------------------------------
*/

params {
    config_profile_name        = 'Test profile'
    config_profile_description = 'Minimal test dataset to check pipeline function'

    // Limit resources so that this can run on GitHub Actions
    max_cpus   = 2
    max_memory = '6.GB'
    max_time   = '6.h'

    // Input data
    queryseqfile = "https://github.com/nf-core/test-datasets/raw/phyloplace/testdata/PF14720_3_sequences.faa"
    refseqfile   = "https://github.com/nf-core/test-datasets/raw/phyloplace/testdata/PF14720_seed.faa"
    hmmfile      = "https://github.com/nf-core/test-datasets/raw/phyloplace/testdata/PF14720.hmm"
    refphylogeny = "https://github.com/nf-core/test-datasets/raw/phyloplace/testdata/PF14720_seed.ft.LGCAT.newick"
    model        = "LG"
    taxonomy     = "https://github.com/nf-core/test-datasets/raw/modules/data/delete_me/gappa/gappa_taxonomy.tsv"
}
